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TimeXNet Web - Identify active gene networks and pathways using time-course biological data

KEGG Pathway Enrichment

Job Name:
Response of Myeloma Cells to Chemotherapy
Current Gene List:
Background List:
Whole Genome
162 chart records
Note: Only the top 1000 records are shown here
Category Term Genes Count % P-value Benjamini
KEGG_PATHWAY hsa05200:Pathways in cancer
270 14.5 1.2e-95 3.2e-93
KEGG_PATHWAY hsa04151:PI3K-Akt signaling pathway
233 12.5 2.0e-79 2.6e-77
KEGG_PATHWAY hsa05166:HTLV-I infection
183 9.8 7.3e-68 6.4e-66
KEGG_PATHWAY hsa05161:Hepatitis B
128 6.9 9.5e-67 6.2e-65
KEGG_PATHWAY hsa05205:Proteoglycans in cancer
150 8.1 7.7e-60 4.0e-58
KEGG_PATHWAY hsa04510:Focal adhesion
142 7.6 3.7e-49 1.6e-47
KEGG_PATHWAY hsa04722:Neurotrophin signaling pathway
101 5.4 2.5e-48 9.4e-47
KEGG_PATHWAY hsa04062:Chemokine signaling pathway
132 7.1 6.7e-48 2.2e-46
KEGG_PATHWAY hsa04014:Ras signaling pathway
147 7.9 4.0e-46 1.1e-44
KEGG_PATHWAY hsa04728:Dopaminergic synapse
103 5.5 9.0e-46 2.4e-44
KEGG_PATHWAY hsa04015:Rap1 signaling pathway
139 7.5 6.8e-45 1.6e-43
KEGG_PATHWAY hsa04915:Estrogen signaling pathway
87 4.7 1.2e-44 2.6e-43
KEGG_PATHWAY hsa05215:Prostate cancer
80 4.3 1.8e-43 3.7e-42
KEGG_PATHWAY hsa04010:MAPK signaling pathway
154 8.3 1.9e-42 3.6e-41
KEGG_PATHWAY hsa05142:Chagas disease (American trypanosomiasis)
88 4.7 2.2e-42 3.8e-41
KEGG_PATHWAY hsa04380:Osteoclast differentiation
99 5.3 1.1e-39 1.8e-38
KEGG_PATHWAY hsa04114:Oocyte meiosis
88 4.7 3.1e-39 4.8e-38
KEGG_PATHWAY hsa04024:cAMP signaling pathway
127 6.8 8.5e-39 1.2e-37
KEGG_PATHWAY hsa05162:Measles
99 5.3 1.0e-38 1.4e-37
KEGG_PATHWAY hsa04668:TNF signaling pathway
86 4.6 1.2e-38 1.6e-37
KEGG_PATHWAY hsa04914:Progesterone-mediated oocyte maturation
76 4.1 1.6e-38 2.0e-37
KEGG_PATHWAY hsa04660:T cell receptor signaling pathway
84 4.5 4.7e-38 5.6e-37
KEGG_PATHWAY hsa05220:Chronic myeloid leukemia
67 3.6 8.3e-38 9.4e-37
KEGG_PATHWAY hsa05169:Epstein-Barr virus infection
122 6.6 2.5e-37 2.8e-36
KEGG_PATHWAY hsa04620:Toll-like receptor signaling pathway
84 4.5 2.6e-36 2.7e-35
KEGG_PATHWAY hsa04910:Insulin signaling pathway
98 5.3 1.8e-35 1.8e-34
KEGG_PATHWAY hsa05164:Influenza A
113 6.1 3.2e-35 3.1e-34
KEGG_PATHWAY hsa04012:ErbB signaling pathway
73 3.9 1.4e-34 1.3e-33
KEGG_PATHWAY hsa04713:Circadian entrainment
77 4.1 1.7e-34 1.5e-33
KEGG_PATHWAY hsa04630:Jak-STAT signaling pathway
100 5.4 1.8e-34 1.5e-33
KEGG_PATHWAY hsa05152:Tuberculosis
113 6.1 3.4e-34 2.8e-33
KEGG_PATHWAY hsa04810:Regulation of actin cytoskeleton
125 6.7 3.6e-33 3.0e-32
KEGG_PATHWAY hsa05168:Herpes simplex infection
114 6.1 4.6e-33 3.6e-32
KEGG_PATHWAY hsa05160:Hepatitis C
93 5.0 8.5e-33 6.5e-32
KEGG_PATHWAY hsa04110:Cell cycle
89 4.8 9.2e-33 6.9e-32
KEGG_PATHWAY hsa05221:Acute myeloid leukemia
54 2.9 2.2e-32 1.6e-31
KEGG_PATHWAY hsa04261:Adrenergic signaling in cardiomyocytes
98 5.3 2.7e-32 1.9e-31
KEGG_PATHWAY hsa05214:Glioma
59 3.2 8.6e-32 5.9e-31
KEGG_PATHWAY hsa04725:Cholinergic synapse
82 4.4 1.2e-31 8.3e-31
KEGG_PATHWAY hsa05145:Toxoplasmosis
85 4.6 1.8e-31 1.2e-30
KEGG_PATHWAY hsa04022:cGMP-PKG signaling pathway
105 5.6 2.9e-31 1.8e-30
KEGG_PATHWAY hsa04912:GnRH signaling pathway
72 3.9 5.1e-31 3.2e-30
KEGG_PATHWAY hsa05203:Viral carcinogenesis
119 6.4 2.0e-30 1.2e-29
KEGG_PATHWAY hsa04919:Thyroid hormone signaling pathway
82 4.4 2.7e-30 1.6e-29
KEGG_PATHWAY hsa04917:Prolactin signaling pathway
61 3.3 5.4e-30 3.1e-29
KEGG_PATHWAY hsa05213:Endometrial cancer
50 2.7 9.4e-30 5.3e-29
KEGG_PATHWAY hsa04720:Long-term potentiation
58 3.1 1.4e-29 7.6e-29
KEGG_PATHWAY hsa05212:Pancreatic cancer
57 3.1 5.7e-29 3.1e-28
KEGG_PATHWAY hsa04068:FoxO signaling pathway
88 4.7 6.0e-28 3.2e-27
KEGG_PATHWAY hsa04916:Melanogenesis
73 3.9 1.3e-27 6.6e-27
KEGG_PATHWAY hsa05210:Colorectal cancer
53 2.9 8.1e-26 4.1e-25
KEGG_PATHWAY hsa04071:Sphingolipid signaling pathway
79 4.2 3.3e-25 1.6e-24
KEGG_PATHWAY hsa04650:Natural killer cell mediated cytotoxicity
79 4.2 1.6e-24 7.9e-24
KEGG_PATHWAY hsa05222:Small cell lung cancer
63 3.4 1.9e-24 9.2e-24
KEGG_PATHWAY hsa04931:Insulin resistance
73 3.9 2.3e-24 1.1e-23
KEGG_PATHWAY hsa04662:B cell receptor signaling pathway
55 3.0 5.8e-24 2.7e-23
KEGG_PATHWAY hsa04064:NF-kappa B signaling pathway
63 3.4 1.5e-23 6.8e-23
KEGG_PATHWAY hsa04210:Apoptosis
51 2.7 2.3e-23 1.0e-22
KEGG_PATHWAY hsa04540:Gap junction
63 3.4 4.0e-23 1.8e-22
KEGG_PATHWAY hsa04921:Oxytocin signaling pathway
91 4.9 5.7e-23 2.5e-22
KEGG_PATHWAY hsa04370:VEGF signaling pathway
50 2.7 9.0e-23 3.8e-22
KEGG_PATHWAY hsa04611:Platelet activation
80 4.3 9.3e-23 3.9e-22
KEGG_PATHWAY hsa04310:Wnt signaling pathway
83 4.5 1.1e-22 4.7e-22
KEGG_PATHWAY hsa04622:RIG-I-like receptor signaling pathway
54 2.9 2.4e-22 9.8e-22
KEGG_PATHWAY hsa05223:Non-small cell lung cancer
47 2.5 3.2e-22 1.3e-21
KEGG_PATHWAY hsa04750:Inflammatory mediator regulation of TRP channels
66 3.6 6.4e-22 2.5e-21
KEGG_PATHWAY hsa05218:Melanoma
53 2.9 7.9e-21 3.1e-20
KEGG_PATHWAY hsa04390:Hippo signaling pathway
85 4.6 1.3e-20 5.1e-20
KEGG_PATHWAY hsa04664:Fc epsilon RI signaling pathway
51 2.7 3.4e-20 1.3e-19
KEGG_PATHWAY hsa05211:Renal cell carcinoma
49 2.6 1.4e-19 5.3e-19
KEGG_PATHWAY hsa04670:Leukocyte transendothelial migration
71 3.8 1.8e-19 6.6e-19
KEGG_PATHWAY hsa05146:Amoebiasis
66 3.6 3.1e-19 1.1e-18
KEGG_PATHWAY hsa05031:Amphetamine addiction
49 2.6 4.1e-19 1.5e-18
KEGG_PATHWAY hsa04060:Cytokine-cytokine receptor interaction
108 5.8 4.0e-18 1.4e-17
KEGG_PATHWAY hsa04066:HIF-1 signaling pathway
61 3.3 8.4e-18 2.9e-17
KEGG_PATHWAY hsa04666:Fc gamma R-mediated phagocytosis
55 3.0 1.6e-17 5.6e-17
KEGG_PATHWAY hsa04550:Signaling pathways regulating pluripotency of stem cells
76 4.1 2.8e-17 9.4e-17
KEGG_PATHWAY hsa04152:AMPK signaling pathway
69 3.7 5.6e-17 3.3e-16
KEGG_PATHWAY hsa04923:Regulation of lipolysis in adipocytes
42 2.3 1.1e-16 3.3e-16
KEGG_PATHWAY hsa05133:Pertussis
50 2.7 2.0e-16 6.7e-16
KEGG_PATHWAY hsa05100:Bacterial invasion of epithelial cells
51 2.7 3.1e-16 1.1e-15
KEGG_PATHWAY hsa04723:Retrograde endocannabinoid signaling
60 3.2 4.6e-16 1.4e-15
KEGG_PATHWAY hsa04520:Adherens junction
48 2.6 4.9e-16 1.4e-15
KEGG_PATHWAY hsa04925:Aldosterone synthesis and secretion
52 2.8 5.8e-16 1.7e-15
KEGG_PATHWAY hsa04730:Long-term depression
43 2.3 7.7e-16 2.3e-15
KEGG_PATHWAY hsa05131:Shigellosis
44 2.4 3.5e-15 1.0e-14
KEGG_PATHWAY hsa05219:Bladder cancer
33 1.8 1.3e-14 4.0e-14
KEGG_PATHWAY hsa04922:Glucagon signaling pathway
57 3.1 1.7e-14 5.0e-14
KEGG_PATHWAY hsa04918:Thyroid hormone synthesis
45 2.4 6.3e-14 1.8e-13
KEGG_PATHWAY hsa05140:Leishmaniasis
45 2.4 1.3e-13 3.8e-13
KEGG_PATHWAY hsa04724:Glutamatergic synapse
61 3.3 1.6e-13 4.5e-13
KEGG_PATHWAY hsa05014:Amyotrophic lateral sclerosis (ALS)
36 1.9 2.0e-13 5.7e-13
KEGG_PATHWAY hsa05231:Choline metabolism in cancer
56 3.0 2.6e-13 7.1e-13
KEGG_PATHWAY hsa04621:NOD-like receptor signaling pathway
38 2.0 2.9e-13 7.9e-13
KEGG_PATHWAY hsa04150:mTOR signaling pathway
39 2.1 4.9e-13 1.3e-12
KEGG_PATHWAY hsa04020:Calcium signaling pathway
81 4.4 1.5e-12 3.9e-12
KEGG_PATHWAY hsa04971:Gastric acid secretion
44 2.4 3.0e-12 8.1e-12
KEGG_PATHWAY hsa04911:Insulin secretion
48 2.6 6.9e-12 1.8e-11
KEGG_PATHWAY hsa04530:Tight junction
65 3.5 2.5e-11 6.7e-11
KEGG_PATHWAY hsa04144:Endocytosis
102 5.5 3.2e-11 8.4e-11
KEGG_PATHWAY hsa05032:Morphine addiction
49 2.6 4.0e-11 1.0e-10
KEGG_PATHWAY hsa05030:Cocaine addiction
33 1.8 4.0e-11 1.0e-10
KEGG_PATHWAY hsa05216:Thyroid cancer
24 1.3 4.3e-11 1.1e-10
KEGG_PATHWAY hsa04115:p53 signaling pathway
40 2.2 5.2e-11 1.3e-10
KEGG_PATHWAY hsa05202:Transcriptional misregulation in cancer
74 4.0 7.3e-11 1.8e-10
KEGG_PATHWAY hsa04270:Vascular smooth muscle contraction
58 3.1 9.2e-11 2.3e-10
KEGG_PATHWAY hsa04960:Aldosterone-regulated sodium reabsorption
28 1.5 1.8e-10 4.4e-10
KEGG_PATHWAY hsa05120:Epithelial cell signaling in Helicobacter pylori infection
39 2.1 2.7e-10 6.4e-10
KEGG_PATHWAY hsa04726:Serotonergic synapse
54 2.9 4.9e-10 1.2e-9
KEGG_PATHWAY hsa04930:Type II diabetes mellitus
31 1.7 8.0e-10 1.9e-9
KEGG_PATHWAY hsa05132:Salmonella infection
44 2.4 8.8e-10 2.1e-9
KEGG_PATHWAY hsa05230:Central carbon metabolism in cancer
37 2.0 1.1e-9 2.5e-9
KEGG_PATHWAY hsa04350:TGF-beta signaling pathway
44 2.4 1.4e-9 3.3e-9
KEGG_PATHWAY hsa04727:GABAergic synapse
44 2.4 2.3e-9 5.3e-9
KEGG_PATHWAY hsa04924:Renin secretion
36 1.9 5.1e-9 1.2e-8
KEGG_PATHWAY hsa04360:Axon guidance
57 3.1 6.4e-9 1.4e-8
KEGG_PATHWAY hsa04920:Adipocytokine signaling pathway
38 2.0 6.5e-9 1.4e-8
KEGG_PATHWAY hsa05034:Alcoholism
72 3.9 9.0e-9 2.0e-8
KEGG_PATHWAY hsa05321:Inflammatory bowel disease (IBD)
35 1.9 2.3e-8 4.9e-8
KEGG_PATHWAY hsa04932:Non-alcoholic fatty liver disease (NAFLD)
63 3.4 2.8e-8 6.1e-8
KEGG_PATHWAY hsa05134:Legionellosis
31 1.7 4.0e-8 8.5e-8
KEGG_PATHWAY hsa05144:Malaria
29 1.6 4.9e-8 1.1e-7
KEGG_PATHWAY hsa04140:Regulation of autophagy
25 1.3 6.3e-8 1.3e-7
KEGG_PATHWAY hsa04612:Antigen processing and presentation
38 2.0 1.1e-7 2.3e-7
KEGG_PATHWAY hsa04970:Salivary secretion
41 2.2 1.6e-7 3.4e-7
KEGG_PATHWAY hsa05206:MicroRNAs in cancer
99 5.3 1.7e-7 3.5e-7
KEGG_PATHWAY hsa05143:African trypanosomiasis
22 1.2 1.9e-7 3.8e-7
KEGG_PATHWAY hsa05020:Prion diseases
22 1.2 1.9e-7 3.8e-7
KEGG_PATHWAY hsa05320:Autoimmune thyroid disease
28 1.5 1.2e-6 2.4e-6
KEGG_PATHWAY hsa05217:Basal cell carcinoma
29 1.6 1.2e-6 2.5e-6
KEGG_PATHWAY hsa04623:Cytosolic DNA-sensing pathway
32 1.7 1.4e-6 2.7e-6
KEGG_PATHWAY hsa05130:Pathogenic Escherichia coli infection
27 1.5 2.9e-6 5.7e-6
KEGG_PATHWAY hsa05416:Viral myocarditis
29 1.6 3.1e-6 6.1e-6
KEGG_PATHWAY hsa04640:Hematopoietic cell lineage
38 2.0 3.5e-6 6.8e-6
KEGG_PATHWAY hsa05010:Alzheimer's disease
62 3.3 5.4e-6 1.1e-5
KEGG_PATHWAY hsa04120:Ubiquitin mediated proteolysis
53 2.9 6.2e-6 1.2e-5
KEGG_PATHWAY hsa04512:ECM-receptor interaction
38 2.0 6.8e-6 1.3e-5
KEGG_PATHWAY hsa05414:Dilated cardiomyopathy
37 2.0 7.3e-6 1.4e-5
KEGG_PATHWAY hsa04961:Endocrine and other factor-regulated calcium reabsorption
24 1.3 1.0e-5 1.9e-5
KEGG_PATHWAY hsa04972:Pancreatic secretion
39 2.1 1.6e-5 2.9e-5
KEGG_PATHWAY hsa05340:Primary immunodeficiency
19 1.0 5.1e-5 9.6e-5
KEGG_PATHWAY hsa04962:Vasopressin-regulated water reabsorption
22 1.2 9.1e-5 0.00017
KEGG_PATHWAY hsa05323:Rheumatoid arthritis
35 1.9 0.00016 0.0003
KEGG_PATHWAY hsa04913:Ovarian steroidogenesis
23 1.2 0.00019 0.00035
KEGG_PATHWAY hsa05412:Arrhythmogenic right ventricular cardiomyopathy (ARVC)
29 1.6 0.00041 0.00074
KEGG_PATHWAY hsa04320:Dorso-ventral axis formation
15 0.8 0.00047 0.00084
KEGG_PATHWAY hsa05332:Graft-versus-host disease
17 0.9 0.0005 0.00089
KEGG_PATHWAY hsa05330:Allograft rejection
18 1.0 0.00073 0.0013
KEGG_PATHWAY hsa04940:Type I diabetes mellitus
19 1.0 0.0014 0.0025
KEGG_PATHWAY hsa04141:Protein processing in endoplasmic reticulum
54 2.9 0.0015 0.0026
KEGG_PATHWAY hsa04340:Hedgehog signaling pathway
14 0.8 0.0018 0.0031
KEGG_PATHWAY hsa04145:Phagosome
49 2.6 0.0024 0.0041
KEGG_PATHWAY hsa04710:Circadian rhythm
15 0.8 0.0026 0.0045
KEGG_PATHWAY hsa03015:mRNA surveillance pathway
31 1.7 0.0068 0.011
KEGG_PATHWAY hsa04330:Notch signaling pathway
19 1.0 0.0079 0.013
KEGG_PATHWAY hsa04672:Intestinal immune network for IgA production
18 1.0 0.014 0.024
KEGG_PATHWAY hsa04976:Bile secretion
24 1.3 0.014 0.024
KEGG_PATHWAY hsa04973:Carbohydrate digestion and absorption
16 0.9 0.023 0.038
KEGG_PATHWAY hsa05110:Vibrio cholerae infection
19 1.0 0.023 0.038
KEGG_PATHWAY hsa04514:Cell adhesion molecules (CAMs)
41 2.2 0.033 0.054
KEGG_PATHWAY hsa04070:Phosphatidylinositol signaling system
30 1.6 0.035 0.056
KEGG_PATHWAY hsa05410:Hypertrophic cardiomyopathy (HCM)
24 1.3 0.058 0.092